BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C11LP1|AL428526
(829 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1307 1600 0.0
>3x_Contig1307
Length = 7280
Score = 1600 bits (806), Expect = 0.0
Identities = 824/830 (99%), Gaps = 1/830 (0%)
Strand = Plus / Plus
Query: 1 gatccctacgcaccacaaatcggttccaaataaaagaaattgaaggccaatgtgcatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3746 gatccctacgcaccacaaatcggttccaaataaaagaaattgaaggccaatgtgcatatt 3805
Query: 61 tcgtagattgacccaaataaaactgtawatatgtcctattcatgcaatccctcggcgtgc 120
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 3806 tcgtagattgacccaaataaaactgtaaaaatgtcctattcatgcaatccctcggcgtgc 3865
Query: 121 ttcgtagttctttcaatacatctgaaaattcgcctcgtacacagcttttgatcatggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3866 ttcgtagttctttcaatacatctgaaaattcgcctcgtacacagcttttgatcatggcag 3925
Query: 181 aaaagtcaggcacagcttttcgtatcatcttagatcgtaacttttagtatcgcttcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3926 aaaagtcaggcacagcttttcgtatcatcttagatcgtaacttttagtatcgcttcttcc 3985
Query: 241 agaataaagacttacaccacaaaccaagttctttgtattgtcacttttactataaaaaca 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3986 agaataaagacttaaaccacaaaccaagttctttgtattgtcacttttactataaaaaca 4045
Query: 301 tgttttacacgtcttgctcataagattctggaatgcactaaattctccttatgaccgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4046 tgttttacacgtcttgctcataagattctggaatgcactaaattctccttatgaccgctg 4105
Query: 361 ctatgtcacgctgtaaactaacaatcacttcatttgttcccggccaacactagtctcaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4106 ctatgtcacgctgtaaactaacaatcacttcatttgttcccggccaacactagtctcaat 4165
Query: 421 gcatattgaaagttgaaaatcctgttctcgattttmatctatcgaacaatcaaagggaaa 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4166 gcatattgaaagttgaaaatcctgttctcgattttaatctatcgaacaatcaaagggaaa 4225
Query: 481 tttgttgaaaaataatttaattttcaggcgacacttgaaacatatgcttattagtcgttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4226 tttgttgaaaaataatttaattttcaggcgacacttgaaacatatgcttattagtcgttc 4285
Query: 541 ttttgacatgaaaaaaaaaatgaaatg-aaaatcattgacgatgggagctcgatctacaa 599
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 4286 ttttgacatgaaaaaaaaaatgaaatgaaaaatcattgacgatggaagctcgatctacaa 4345
Query: 600 tagaaagttcaaaacacttatcccaagtttgccttgtgtgttatacactgctaacaagtt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4346 tagaaagttcaaaacacttatcccaagtttgccttgtgtgttatacactgctaacaagtt 4405
Query: 660 ggtagatttctttacgtctaaaggaacctggacagcacaaagtagtagataaaagaaagc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4406 ggtagatttctttacgtctaaaggaacctggacagcacaaagtagtagataaaagaaagc 4465
Query: 720 taggaccgtatctctttcacgcacaatgttcagatccgcaatccttcgtgctgggaaagt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4466 taggaccgtatctctttcacgcacaatgttcagatccgcaatccttcgtgctgggaaagt 4525
Query: 780 atccccaagaacaattgttcaacctcagttatttggcactcaaagggttg 829
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4526 atccccaagaacaattgttcaacctcagttatttggcactcaaagggttg 4575
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7721
Number of Sequences: 1807
Number of extensions: 7721
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 829
length of database: 10,358,551
effective HSP length: 16
effective length of query: 813
effective length of database: 10,329,639
effective search space: 8397996507
effective search space used: 8397996507
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)